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A software for the cross-analysis of RNA mutate-and-map and comparative data.

We calculate a predicted ncRNA-mRNA interactome in order to study the influence of opportunistic crosstalk interactions and investigate possible related arrangements.

A nested 2-level cross-validation ensemble learning pipeline suggests a negative pressure against crosstalk snoRNA-mRNA interactions in Saccharomyces Cerevisae

Data, code and documentation relating to the manuscript https://www.biorxiv.org/content/10.1101/510495v2.abstract

Code, data, results and supplementary material for "Finding recurrent RNA structural networks with fast maximal common subgraphs of edge-colored graphs" by A. Soulé et al.

Hybrid Bipartite Graph Formulation implementation