Commit 3f701eac by waldispuhl

format NAR

parent 472ae2cf
 ... ... @@ -284,10 +284,10 @@ Since both negative and positive correlations can indicate positions of interest, we use two different, $\zeta^-$ and $\zeta^+$, thresholds for the \NPMI{}s. $\zeta^+$ will be a bound on the positive values of the \NPMI and $\zeta^-$ on the negative ones. Due to the high number of possible combinations, \NPMI{}s having values $-1$ are frequent and uninformative. They are discarded. {\color{red} For those loops deemed as regions of interest, we predict that the set of positions with an \NPMI above $\zeta^+$ or below $\zeta^-$ are nucleotides in binding interfaces while the others are not.} {\color{red} For those loops deemed as regions of interest, we predict that the set of positions with an \NPMI above $\zeta^+$ or below $\zeta^-$ are nucleotides in binding interfaces while the others are not.}\\ {\removelatexerror \begin{algorithm} \begin{algorithm}[H] \DontPrintSemicolon \SetAlgoLined \SetKwFunction{shapeDisruption}{shapeDisruption} ... ... @@ -308,7 +308,7 @@ $l = D = \varnothing$\; \end{algorithm}} {\removelatexerror \begin{algorithm} \begin{algorithm}[H] \DontPrintSemicolon \SetAlgoLined \SetKwFunction{getAllNPMIs}{getAllNPMIs} ... ... @@ -335,7 +335,7 @@ \$\zeta^-\leftarrow -1\times\percentile(-1\times a[-1
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