updated README

.idea/inspectionProfiles/Project_Default.xml

+<component name="InspectionProjectProfileManager">
+  <profile version="1.0">
+    <option name="myName" value="Project Default" />
+    <inspection_tool class="PyPep8Inspection" enabled="true" level="WEAK WARNING" enabled_by_default="true">
+      <option name="ignoredErrors">
+        <list>
+          <option value="W29" />
+          <option value="E501" />
+        </list>
+      </option>
+    </inspection_tool>
+  </profile>
+</component>
\ No newline at end of file

.idea/vcs.xml

+<?xml version="1.0" encoding="UTF-8"?>
+<project version="4">
+  <component name="VcsDirectoryMappings">
+    <mapping directory="$PROJECT_DIR$" vcs="Git" />
+  </component>
+</project>
\ No newline at end of file

src/module_from_desc.py

@@ -111,6 +111,7 @@ def create_module(desc,fasta):
     pickle.dump(MODULES, open("../models/MODULES.cPickle", 'wb'))
     return graph_list
 
+
 def fuse_existing_databases(new_dataset,name1,name2,l1,l2):
     one_of_each_graph = []
     a1 = pickle.load(open(name1 + "_one_of_each_graph.cPickle", 'rb'))
@@ -161,7 +162,7 @@ def fuse_existing_databases(new_dataset,name1,name2,l1,l2):
 
 
 if __name__ == "__main__":
-    #esc_file = "../models/1A1T.B.1.desc"
+    #desc_file = "../models/1A1T.B.1.desc"
     #fasta_file = "../models/input.fasta"
     #graphs = create_module(desc_file,fasta_file)
-    fuse_existing_databases("all_carnaval",'carnaval','jeffrey',[0, 5, 8, 26, 6, 18, 19, 21, 24, 25, 39, 53, 54, 58, 119, 122, 135, 146, 162, 168, 191, 194, 198, 216],[1,4,7,10,11,24,33,40,55,66,69,101,103,113,149,156,167])
\ No newline at end of file
+    fuse_existing_databases("all_carnaval",'carnaval','jeffrey',[0, 5, 8, 26, 6, 18, 19, 21, 24, 25, 39, 53, 54, 58, 119, 122, 135, 146, 162, 168, 191, 194, 198, 216],[1,4,7,10,11,24,33,40,55,66,69,101,103,113,149,156,167])