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Roman Sarrazin-Gendron
BP6.1
Commits
38d7b5ae
Commit
38d7b5ae
authored
Jul 07, 2018
by
Roman Sarrazin-Gendron
Browse files
valid
parent
a68cd948
Changes
1
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Inline
Side-by-side
src/validation_3dmotif.py
View file @
38d7b5ae
...
...
@@ -6,10 +6,10 @@ import BayesPairing
import
random
from
Bio
import
SeqIO
from
random
import
shuffle
DATASET_NAME
=
"all_
full3
_rna3dmotif"
graphs
=
pickle
.
load
(
open
(
"../models/all_
full3
_rna3dmotif_one_of_each_graph.cPickle"
,
"rb"
))
pdbs
=
pickle
.
load
(
open
(
"../models/all_
full3
_rna3dmotif_PDB_names.cPickle"
,
"rb"
))
pdb_positions
=
pickle
.
load
(
open
(
"../models/all_
full3
_rna3dmotif_PDB_positions.cPickle"
,
"rb"
))
DATASET_NAME
=
"all_
21+
_rna3dmotif
_106
"
graphs
=
pickle
.
load
(
open
(
"../models/all_
21+
_rna3dmotif_
106_
one_of_each_graph.cPickle"
,
"rb"
))
pdbs
=
pickle
.
load
(
open
(
"../models/all_
21+
_rna3dmotif_
106_
PDB_names.cPickle"
,
"rb"
))
pdb_positions
=
pickle
.
load
(
open
(
"../models/all_
21+
_rna3dmotif_
106_
PDB_positions.cPickle"
,
"rb"
))
# print(pdbs)
fasta_path
=
"pdb_seqres.txt"
...
...
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