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Carlos GO
RNAmigos_server
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d162792b
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d162792b
authored
Jun 17, 2020
by
Carlos GO
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help
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@@ -21,6 +21,7 @@ For full details see article.
<h1>
What isn't RNAmigos?
</h1>
RNAmigos is not a docking tool, or an affinity predictor, hence we do not require a docked complex as input, nor do we return an affinity score.
We also do not scan full RNAs for binding sites, this tool assumes that the input structure already represents a binding site.
<h1>
Uploading Structure Data
</h1>
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@@ -81,6 +82,8 @@ Here is a sample node-link JSON:
The
<code>
'id'
</code>
attribute can be whatever you like. In this case, it represents a chain and position in a PDB.
<b>
IMPORTANT:
</b>
file must not exceed 1MB. We do not process whole RNAs, just binding sites, which should be a handful of residues large.
<h1>
Uploading Ligand Database
</h1>
If you provide your own ligand database to screen, we will use the prediction to return the most similar ligands in the database to the prediction.
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