Commit fdd6f849 authored by Carlos GO's avatar Carlos GO
Browse files

reqs

parent 90e02dbe
......@@ -8,5 +8,23 @@ This repository is an implementation of ligand prediction from an RNA base pairi
> [[Paper]](https://www.biorxiv.org/content/10.1101/701326v3)
<img src="images/rnamigos.png" width="200"/>
![](images/rnamigos.png)
We implement three major components:
* `data_processor`: building a training set
* `learning`: RGCN training
* `tools`: general tools such as graph drawing, loading, etc.
* `post`: validation and visualization of results
See README in each folder for details on how to use each component.
## Requirements
* Python >= 3.6
* Pytorch
* dgl
* OpenBabel
* BioPython
* tqdm
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