fixed imports

README.md

@@ -20,6 +20,8 @@ NOTE: The user friendly API is currently being built and tested. Sample usage de
 
 ## Installing
 
+pip will automatically install any necessary dependencies.
+
 ```
 git clone git@jwgitlab.cs.mcgill.ca:cgoliver/rnamigos.git
 pip install .
@@ -50,7 +52,7 @@ From a graph object, or a pickled graph we can draw the graph.
 ```python
 >>> G = nx.read_gpickle('../Data/sample_graphs/3ds7_GNG_P.nxpickle')
 >>> H = nx.read_gpickle('../Data/sample_graphs/3skt_GNG_L.nxpickle')
->>> from RNAmigos import pocket_draw
+>>> from RNAmigos.pocket_draw import graph_draw
 >>> graph_draw(G, show=True)
 ```
 
@@ -61,7 +63,7 @@ From a graph object, or a pickled graph we can draw the graph.
 For a pair of graphs.
 
 ```python
->>> from RNAmigos import ged
+>>> from RNAmigos.rna_ged import ged
 >>> graphs = (G, H) #graphs currently need to be pased as single argument for multiprocessing.
 >>> aln, (G, H), time = ged(graphs)
 >>> aln.cost # get distance